PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36754.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 460aa    MW: 50714.7 Da    PI: 6.5313
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36754.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.6e-063513891154
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  KHN36754.1 351 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 389
                 5778999**********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.481340389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.40E-7350393No hitNo description
SuperFamilySSF474591.7E-11350406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0025351395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-10354397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MADNDQFQAS GNWWETARSV RYESGASQSS SSAITNIGNN FGWQQGSDMA DMKPRSSMDS  60
SSVVFHDTQN NKLQQPDSAT STDPNLHMMG LGLSSQTMDW NQASLLRGEK GTENSFRSML  120
QENLSSSRTN FQQETGNMGL SQQVQWRSEK MFSSESSTNE FKQVNNRGGG GFSLDQSQFS  180
PQYSSGDSTV TSQGLPSSNF QIDSSALYGT PSILQGLLGP DHNNQPQQQQ PMSFPYQTTS  240
YGLNSNELVP SWSKVPQFLR ASPPKQPPNN QLHFTNNATF WNDSEAANNK DVRPSFFPSL  300
QPPFSTPNFE VQSKNISEVR ESGTVVKKSG NEPAPKRTRN ESPSPLPAFK VRKEKMGDRI  360
TALQQLVSPF GKTDTASVLS EAIEYIKFLH EQVTALSTPY MKSGAPMQIQ QNSGKSKEAE  420
GPKQDLRSRG LCLVPVSSTF PVTHETTVDF WTPTFGGTSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-174AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541866.10.0PREDICTED: transcription factor bHLH123-like isoform X1
RefseqXP_006594798.10.0PREDICTED: transcription factor bHLH123-like isoform X1
SwissprotQ8GXT35e-93BH123_ARATH; Transcription factor bHLH123
TrEMBLA0A0B2RX530.0A0A0B2RX53_GLYSO; Transcription factor bHLH123
TrEMBLK7M2F90.0K7M2F9_SOYBN; Uncharacterized protein
STRINGGLYMA13G36010.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.16e-80bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]